Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-lactate dehydrogenase (cytochrome)/(s)-mandelate dehydrogenase | SAMN06295920_10782 | Not Available | Negative | 3312928 - 3314130 | 42983.4 |
| sugar phosphate permease | SAMN06295920_10783 | Not Available | Negative | 3314169 - 3315395 | 42158.1 |
| 3-methylfumaryl-coa hydratase | SAMN06295920_10784 | Not Available | Negative | 3315729 - 3316574 | 30385.4 |
| acyl-coa dehydrogenase | SAMN06295920_10785 | Not Available | Negative | 3316574 - 3317737 | 42602.1 |
| crotonobetaine/carnitine-coa ligase | SAMN06295920_10786 | Not Available | Negative | 3317804 - 3319423 | 60675.0 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN06295920_10787 | Not Available | Positive | 3319600 - 3320352 | 25719.0 |
| cytochrome p450 | SAMN06295920_10788 | Not Available | Negative | 3320374 - 3321543 | 43926.7 |
| aldehyde dehydrogenase (nad+) | SAMN06295920_10789 | Not Available | Positive | 3321779 - 3323281 | 52694.1 |
| iron complex outermembrane recepter protein | SAMN06295920_10790 | Not Available | Positive | 3323471 - 3325918 | 88137.1 |
| 4-pyridoxolactonase | SAMN06295920_10791 | Not Available | Positive | 3325959 - 3326753 | 29751.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.