Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
n-acyl-d-aspartate/d-glutamate deacylaseSAMN06295920_10732Not AvailablePositive3257885 - 325960062053.0
glyoxylase, beta-lactamase superfamily iiSAMN06295920_10733Not AvailablePositive3259612 - 326044830737.6
iron complex outermembrane recepter proteinSAMN06295920_10734Not AvailablePositive3260701 - 326290580538.8
aldehyde dehydrogenase (nad+)SAMN06295920_10735Not AvailablePositive3262970 - 326440350649.4
2-dehydro-3-deoxyglucarate aldolase/4-hydroxy-2-oxoheptanedioate aldolaseSAMN06295920_10736Not AvailablePositive3264492 - 326526228041.7
transcriptional regulator, arac familySAMN06295920_10737Not AvailableNegative3265301 - 326631136537.9
2-dehydro-3-deoxyglucarate aldolase/4-hydroxy-2-oxoheptanedioate aldolaseSAMN06295920_10738Not AvailablePositive3266708 - 326748727906.0
2,4-diketo-3-deoxy-l-fuconate hydrolaseSAMN06295920_10739Not AvailablePositive3267513 - 326837630918.2
l-lactate dehydrogenase (cytochrome)SAMN06295920_10740Not AvailablePositive3268373 - 326952741201.0
predicted arabinose efflux permease, mfs familySAMN06295920_10741Not AvailablePositive3269539 - 327081644958.8

Displaying genes 3191 – 3200 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.