Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295920_1072 | Not Available | Positive | 3228311 - 3228709 | 14825.0 |
| type iv secretion system protein virb11 | SAMN06295920_1073 | Not Available | Positive | 3228706 - 3229698 | 35335.2 |
| type iv secretion system protein virb2 | SAMN06295920_1074 | Not Available | Positive | 3229695 - 3230030 | 11702.8 |
| type iv secretion system protein virb3 | SAMN06295920_1075 | Not Available | Positive | 3230027 - 3230299 | 9486.79 |
| type iv secretion system protein virb4 | SAMN06295920_1076 | Not Available | Positive | 3230293 - 3232767 | 90201.5 |
| p-type conjugative transfer protein trbj | SAMN06295920_1077 | Not Available | Positive | 3232764 - 3233495 | 26590.9 |
| type iv secretion system protein trbl | SAMN06295920_1078 | Not Available | Positive | 3233607 - 3234920 | 44486.9 |
| type iv secretion system protein virb5 | SAMN06295920_1079 | Not Available | Positive | 3234925 - 3235737 | 29946.6 |
| type iv secretion system protein virb9 | SAMN06295920_10710 | Not Available | Positive | 3235734 - 3236711 | 35161.7 |
| type iv secretion system protein virb10 | SAMN06295920_10711 | Not Available | Positive | 3236708 - 3237931 | 43179.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.