Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295920_106333 | Not Available | Negative | 3214917 - 3215381 | 16606.1 |
| transcriptional regulator, xre family | SAMN06295920_106334 | Not Available | Negative | 3215452 - 3216873 | 52810.2 |
| propionyl-coa carboxylase carboxyltransferase subunit | SAMN06295920_106335 | Not Available | Positive | 3217001 - 3218533 | 55784.1 |
| acetyl-coa c-acetyltransferase | SAMN06295920_106336 | Not Available | Positive | 3218571 - 3219761 | 41169.1 |
| methylmalonyl-coa epimerase | SAMN06295920_106337 | Not Available | Positive | 3219758 - 3220183 | 15293.5 |
| methylmalonyl-coa mutase | SAMN06295920_106338 | Not Available | Positive | 3220215 - 3222365 | 77266.4 |
| biotin synthase | SAMN06295920_106339 | Not Available | Positive | 3222362 - 3223378 | 36438.6 |
| propionyl-coa carboxylase alpha chain | SAMN06295920_106340 | Not Available | Positive | 3223520 - 3225502 | 71475.7 |
| hypothetical protein | SAMN06295920_106341 | Not Available | Negative | 3225622 - 3225726 | 3462.2 |
| type iv secretion system protein vird4 | SAMN06295920_1071 | Not Available | Positive | 3226286 - 3228307 | 74854.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.