Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lipopolysaccharide export system atp-binding proteinSAMN06295920_106323Not AvailableNegative3206722 - 320749828001.0
lipopolysaccharide export system protein lptaSAMN06295920_106324Not AvailableNegative3207654 - 320817518077.7
lipopolysaccharide export system protein lptcSAMN06295920_106325Not AvailableNegative3208175 - 320887024987.2
ribonuclease dSAMN06295920_106326Not AvailableNegative3209004 - 320962122792.2
membrane protein terc, possibly involved in tellurium resistanceSAMN06295920_106327Not AvailableNegative3209693 - 321043326623.5
cold-shock dna-binding protein familySAMN06295920_106328Not AvailablePositive3210717 - 321155628462.2
peptide-methionine (r)-s-oxide reductaseSAMN06295920_106329Not AvailableNegative3211755 - 321224017323.8
epoxyqueuosine reductaseSAMN06295920_106330Not AvailablePositive3212335 - 321353142840.2
3-hydroxyacyl-coa dehydrogenaseSAMN06295920_106331Not AvailablePositive3213565 - 321443430449.3
uncharacterized conserved protein, duf952 familySAMN06295920_106332Not AvailablePositive3214452 - 321479912170.5

Displaying genes 3141 – 3150 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.