Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sensor c-di-gmp phosphodiesterase, contains css-motif sensor and eal domainSAMN06295920_106303Not AvailablePositive3186957 - 318857658834.5
mfs transporter, cp family, cyanate transporterSAMN06295920_106304Not AvailableNegative3188486 - 318976643401.2
trna(arg) a34 adenosine deaminase tadaSAMN06295920_106305Not AvailableNegative3189732 - 319022917207.5
imidazolonepropionaseSAMN06295920_106306Not AvailableNegative3190226 - 319167751594.8
dna-binding transcriptional regulator, lysr familySAMN06295920_106307Not AvailablePositive3191783 - 319263430700.1
dihydroorotate oxidase aSAMN06295920_106308Not AvailableNegative3192644 - 319367836071.6
transcriptional regulator, badm/rrf2 familySAMN06295920_106309Not AvailablePositive3193854 - 319425813731.6
iron-regulated abc transporter membrane component sufbSAMN06295920_106310Not AvailablePositive3194262 - 319573454164.0
fe-s cluster assembly atp-binding proteinSAMN06295920_106311Not AvailablePositive3195774 - 319651726640.2
fe-s cluster assembly protein sufdSAMN06295920_106312Not AvailablePositive3196633 - 319771837976.8

Displaying genes 3121 – 3130 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.