Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295920_106263 | Not Available | Negative | 3150012 - 3150194 | 6802.27 |
| 23s rrna m(2)a-2503 methyltransferase | SAMN06295920_106264 | Not Available | Negative | 3150194 - 3151402 | 44967.6 |
| low temperature requirement protein ltra | SAMN06295920_106265 | Not Available | Negative | 3151460 - 3152629 | 41904.1 |
| hypothetical protein | SAMN06295920_106266 | Not Available | Positive | 3152725 - 3153207 | 16672.8 |
| nadh dehydrogenase | SAMN06295920_106267 | Not Available | Negative | 3153383 - 3154588 | 41989.0 |
| transcriptional regulator, badm/rrf2 family | SAMN06295920_106268 | Not Available | Negative | 3154738 - 3155277 | 19178.9 |
| peroxiredoxin, ohr subfamily | SAMN06295920_106269 | Not Available | Negative | 3155461 - 3155886 | 14227.8 |
| transcriptional regulator, marr family | SAMN06295920_106270 | Not Available | Positive | 3155979 - 3156485 | 18278.0 |
| hypothetical protein | SAMN06295920_106271 | Not Available | Negative | 3156491 - 3157129 | 23319.5 |
| two component transcriptional regulator, winged helix family | SAMN06295920_106272 | Not Available | Positive | 3157375 - 3158055 | 24697.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.