Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbon starvation protein | SAMN06295920_106203 | Not Available | Positive | 3085178 - 3087226 | 72279.2 |
| uncharacterized short protein ybdd, duf466 family | SAMN06295920_106204 | Not Available | Positive | 3087223 - 3087408 | 7145.54 |
| na+/h+-dicarboxylate symporter | SAMN06295920_106205 | Not Available | Positive | 3087420 - 3088673 | 43257.0 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN06295920_106206 | Not Available | Positive | 3088673 - 3089185 | 17699.6 |
| ankyrin repeat-containing protein | SAMN06295920_106207 | Not Available | Positive | 3089329 - 3092817 | 122690.0 |
| hypothetical protein | SAMN06295920_106208 | Not Available | Positive | 3092826 - 3095918 | 109879.0 |
| cytochrome p450 | SAMN06295920_106209 | Not Available | Negative | 3095932 - 3098229 | 84916.5 |
| dna-binding transcriptional regulator, iclr family | SAMN06295920_106210 | Not Available | Positive | 3098378 - 3099103 | 24884.2 |
| Trna-leu | Not Available | Not Available | Positive | 3099181 - 3099267 | Not Available |
| pyrophosphate-dependent phosphofructokinase | SAMN06295920_106211 | Not Available | Negative | 3099381 - 3100481 | 39316.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.