Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-formyltetrahydrofolate cyclo-ligase | SAMN06295920_106172 | Not Available | Negative | 3054137 - 3054715 | 20382.4 |
| putative endonuclease | SAMN06295920_106174 | Not Available | Positive | 3055019 - 3055321 | 11589.8 |
| cell division protein zapa | SAMN06295920_106175 | Not Available | Negative | 3055374 - 3055715 | 12210.5 |
| hypothetical protein | SAMN06295920_106176 | Not Available | Negative | 3055715 - 3055915 | 7480.91 |
| transketolase | SAMN06295920_106177 | Not Available | Positive | 3056135 - 3058102 | 69907.2 |
| glyceraldehyde-3-phosphate dehydrogenase (nad+) | SAMN06295920_106178 | Not Available | Positive | 3058117 - 3059124 | 35724.7 |
| mosc domain-containing protein | SAMN06295920_106179 | Not Available | Positive | 3059291 - 3059746 | 16425.0 |
| phosphoglycerate kinase | SAMN06295920_106180 | Not Available | Positive | 3059749 - 3060942 | 41400.6 |
| glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein | SAMN06295920_106181 | Not Available | Positive | 3060944 - 3061396 | 16046.1 |
| fructose-bisphosphate aldolase, class i | SAMN06295920_106182 | Not Available | Positive | 3061393 - 3062289 | 32144.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.