Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| general secretion pathway protein h | SAMN06295920_106162 | Not Available | Positive | 3045060 - 3045494 | 15067.2 |
| type ii secretion system protein i (gspi) | SAMN06295920_106163 | Not Available | Positive | 3045491 - 3045877 | 13397.0 |
| type ii secretion system protein c (gspc) | SAMN06295920_106164 | Not Available | Positive | 3045874 - 3046704 | 26953.3 |
| type ii secretion system protein d (gspd) | SAMN06295920_106165 | Not Available | Positive | 3046716 - 3048761 | 70748.6 |
| hypothetical protein | SAMN06295920_106166 | Not Available | Negative | 3048842 - 3049306 | 16102.1 |
| hypothetical protein | SAMN06295920_106167 | Not Available | Negative | 3049306 - 3049818 | 17874.8 |
| hypothetical protein | SAMN06295920_106168 | Not Available | Negative | 3049821 - 3050504 | 23907.2 |
| nad+ synthase (glutamine-hydrolysing) | SAMN06295920_106169 | Not Available | Negative | 3050524 - 3052587 | 73937.2 |
| diguanylate cyclase | SAMN06295920_106170 | Not Available | Negative | 3052814 - 3053893 | 39063.4 |
| protein of unknown function | SAMN06295920_106171 | Not Available | Negative | 3053925 - 3054140 | 7948.13 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.