Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-trp | Not Available | Not Available | Positive | 3015466 - 3015541 | Not Available |
| protein translocase subunit sece/sec61 gamma | SAMN06295920_106133 | Not Available | Positive | 3015685 - 3015882 | 7279.28 |
| transcription antitermination protein nusg | SAMN06295920_106134 | Not Available | Positive | 3015904 - 3016443 | 19915.9 |
| lsu ribosomal protein l11p | SAMN06295920_106135 | Not Available | Positive | 3016658 - 3017089 | 15178.5 |
| lsu ribosomal protein l1p | SAMN06295920_106136 | Not Available | Positive | 3017094 - 3017792 | 23999.2 |
| hypothetical protein | SAMN06295920_106137 | Not Available | Positive | 3018035 - 3018232 | 6985.66 |
| phosphoribosyl-atp pyrophosphatase | SAMN06295920_106138 | Not Available | Positive | 3018420 - 3018740 | 11022.3 |
| diadenosine tetraphosphate (ap4a) hydrolase | SAMN06295920_106139 | Not Available | Positive | 3018784 - 3019161 | 13838.4 |
| amino acid/polyamine/organocation transporter, apc superfamily | SAMN06295920_106140 | Not Available | Positive | 3019280 - 3020803 | 52971.0 |
| sugar or nucleoside kinase, ribokinase family | SAMN06295920_106141 | Not Available | Negative | 3020859 - 3021860 | 34975.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.