Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-oxosteroid 1-dehydrogenaseSAMN06295920_106102Not AvailablePositive2987865 - 298955960558.4
acetyl esteraseSAMN06295920_106103Not AvailableNegative2989669 - 299058030934.1
dna-binding transcriptional regulator, csgd familySAMN06295920_106104Not AvailablePositive2990598 - 299171940105.2
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN06295920_106105Not AvailableNegative2991880 - 299264725711.7
flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase ssud and methylene tetrahydromethanopterin reductase)SAMN06295920_106106Not AvailableNegative2992644 - 299379542262.4
site-specific dna-methyltransferase (adenine-specific)SAMN06295920_106107Not AvailableNegative2993883 - 299484234202.7
maleylacetoacetate isomeraseSAMN06295920_106108Not AvailableNegative2994839 - 299547723508.2
Trna-proNot AvailableNot AvailablePositive2995589 - 2995665Not Available
superoxide dismutase, fe-mn familySAMN06295920_106110Not AvailableNegative2997943 - 299861723670.3
chromate transporterSAMN06295920_106111Not AvailableNegative2998632 - 300002949261.9

Displaying genes 2921 – 2930 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.