Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
iron complex outermembrane recepter proteinSAMN06295920_101164Not AvailableNegative166197 - 16843780968.4
predicted arabinose efflux permease, mfs familySAMN06295920_101165Not AvailableNegative168467 - 16971443689.8
transcriptional regulator, tetr familySAMN06295920_101166Not AvailablePositive169988 - 17054521174.4
dna-binding transcriptional regulator, marr familySAMN06295920_101167Not AvailableNegative170917 - 17152523278.2
hypothetical proteinSAMN06295920_101168Not AvailableNegative171615 - 17251432359.2
2-keto-3-deoxy-l-rhamnonate aldolase rhmaSAMN06295920_101169Not AvailableNegative172511 - 17329926648.0
3-phenylpropionate/cinnamic acid dioxygenase, small subunitSAMN06295920_101170Not AvailableNegative173349 - 17389721441.4
ring hydroxylating alpha subunit (catalytic domain)SAMN06295920_101171Not AvailableNegative173894 - 17524350659.6
catalytic ligb subunit of aromatic ring-opening dioxygenaseSAMN06295920_101172Not AvailablePositive175436 - 17635632472.7
catalytic ligb subunit of aromatic ring-opening dioxygenaseSAMN06295920_101173Not AvailablePositive176359 - 17735736867.8

Displaying genes 281 – 290 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.