Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sugar phosphate isomerase/epimeraseSAMN06295920_10662Not AvailableNegative2950965 - 295181628711.3
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN06295920_10663Not AvailableNegative2951813 - 295257126147.0
hypothetical proteinSAMN06295920_10664Not AvailableNegative2952583 - 295380045090.1
sulfotransferase family proteinSAMN06295920_10665Not AvailableNegative2953797 - 295504746883.0
threonine dehydrogenaseSAMN06295920_10666Not AvailableNegative2955040 - 295605334916.2
transcriptional regulator, tetr familySAMN06295920_10667Not AvailableNegative2956180 - 295688126059.3
3,4-dihydroxy-9,10-secoandrosta-1,3, 5(10)-triene-9,17-dione 4,5-dioxygenaseSAMN06295920_10668Not AvailablePositive2957048 - 295794132308.2
glutaconate coa-transferase subunit aSAMN06295920_10669Not AvailablePositive2957911 - 295881932743.6
glutaconate coa-transferase subunit bSAMN06295920_10670Not AvailablePositive2958830 - 295962728721.5
steroid delta-isomeraseSAMN06295920_10671Not AvailablePositive2959682 - 296005013093.7

Displaying genes 2881 – 2890 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.