Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrin-iii c-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase | SAMN06295920_105372 | Not Available | Negative | 2861045 - 2861824 | 26975.3 |
| hypothetical protein | SAMN06295920_105373 | Not Available | Positive | 2861910 - 2862905 | 35939.8 |
| udp-glucose pyrophosphorylase | SAMN06295920_105374 | Not Available | Negative | 2862937 - 2863806 | 31251.8 |
| diaminopimelate decarboxylase | SAMN06295920_105375 | Not Available | Negative | 2863872 - 2865143 | 44126.2 |
| hypothetical protein | SAMN06295920_105376 | Not Available | Negative | 2865325 - 2865570 | 8641.41 |
| argininosuccinate lyase | SAMN06295920_105377 | Not Available | Negative | 2865662 - 2867038 | 49409.2 |
| thiol-disulfide isomerase or thioredoxin | SAMN06295920_105378 | Not Available | Positive | 2867055 - 2867597 | 19527.7 |
| catechol 2,3-dioxygenase | SAMN06295920_105379 | Not Available | Negative | 2867713 - 2868096 | 13629.2 |
| aromatic ring-opening dioxygenase, catalytic subunit, ligb family | SAMN06295920_105380 | Not Available | Positive | 2868236 - 2869027 | 28820.2 |
| predicted purr-regulated permease perm | SAMN06295920_105381 | Not Available | Positive | 2869132 - 2870208 | 38663.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.