Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dephospho-coa kinase | SAMN06295920_105342 | Not Available | Negative | 2833144 - 2833752 | 22207.6 |
| shikimate dehydrogenase | SAMN06295920_105343 | Not Available | Negative | 2833767 - 2834621 | 31361.8 |
| septum formation protein | SAMN06295920_105344 | Not Available | Negative | 2834618 - 2835211 | 21212.8 |
| hypothetical protein | SAMN06295920_105345 | Not Available | Negative | 2835264 - 2836088 | 30421.5 |
| uroporphyrinogen decarboxylase | SAMN06295920_105346 | Not Available | Positive | 2836416 - 2837450 | 37136.5 |
| putative membrane protein | SAMN06295920_105347 | Not Available | Positive | 2837455 - 2837907 | 17138.5 |
| transcription termination factor rho | SAMN06295920_105348 | Not Available | Positive | 2838098 - 2839354 | 46557.3 |
| methyltransferase domain-containing protein | SAMN06295920_105349 | Not Available | Positive | 2839373 - 2840077 | 26687.2 |
| dna-binding transcriptional regulator, merr family | SAMN06295920_105350 | Not Available | Negative | 2840082 - 2840483 | 15077.6 |
| ubiquinone/menaquinone biosynthesis c-methylase ubie | SAMN06295920_105351 | Not Available | Positive | 2840557 - 2841414 | 30127.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.