Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aconitase | SAMN06295920_105242 | Not Available | Positive | 2735636 - 2738320 | 96234.4 |
| aconitase | SAMN06295920_105243 | Not Available | Negative | 2738462 - 2741227 | 98945.9 |
| hypothetical protein | SAMN06295920_105244 | Not Available | Positive | 2741823 - 2742110 | 10307.5 |
| transcriptional regulator, lyttr family | SAMN06295920_105245 | Not Available | Positive | 2742507 - 2743358 | 31266.7 |
| sugar transporter | SAMN06295920_105246 | Not Available | Positive | 2743426 - 2744757 | 47848.0 |
| hypothetical protein | SAMN06295920_105247 | Not Available | Negative | 2744767 - 2745435 | 24204.0 |
| dihydroorotase | SAMN06295920_105248 | Not Available | Positive | 2745476 - 2746801 | 47782.1 |
| surface antigen | SAMN06295920_105249 | Not Available | Positive | 2746974 - 2747549 | 20456.8 |
| pare toxin of type ii toxin-antitoxin system, parde | SAMN06295920_105250 | Not Available | Negative | 2747617 - 2747973 | 12983.7 |
| prevent-host-death family protein | SAMN06295920_105251 | Not Available | Negative | 2747977 - 2748240 | 9529.58 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.