Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna(fmet)-specific endonuclease vapc | SAMN06295920_105170 | Not Available | Positive | 2661264 - 2661644 | 13888.8 |
| trna (guanine37-n(1)-) methyltransferase | SAMN06295920_105171 | Not Available | Positive | 2661655 - 2662395 | 26852.1 |
| lsu ribosomal protein l19p | SAMN06295920_105172 | Not Available | Positive | 2662398 - 2662787 | 14499.5 |
| aspartate semialdehyde dehydrogenase | SAMN06295920_105173 | Not Available | Positive | 2662896 - 2663921 | 37281.9 |
| uncharacterized conserved protein | SAMN06295920_105174 | Not Available | Positive | 2664047 - 2664490 | 16520.5 |
| lysophospholipase, alpha-beta hydrolase superfamily | SAMN06295920_105175 | Not Available | Positive | 2664471 - 2665244 | 27112.6 |
| peptidyl-dipeptidase a | SAMN06295920_105176 | Not Available | Positive | 2665354 - 2667213 | 68206.3 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN06295920_105177 | Not Available | Positive | 2667428 - 2668681 | 44281.2 |
| amp nucleosidase | SAMN06295920_105178 | Not Available | Negative | 2668813 - 2670261 | 53500.8 |
| peroxiredoxin | SAMN06295920_105179 | Not Available | Negative | 2670356 - 2670838 | 16782.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.