Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor bamb, contains pqq-like beta-propeller repeat | SAMN06295920_105120 | Not Available | Negative | 2614304 - 2615638 | 46540.8 |
| hypothetical protein | SAMN06295920_105121 | Not Available | Negative | 2615643 - 2616350 | 25152.2 |
| ketopantoate hydroxymethyltransferase | SAMN06295920_105122 | Not Available | Negative | 2616442 - 2617299 | 30348.9 |
| uncharacterized conserved protein, upf0335 family | SAMN06295920_105123 | Not Available | Negative | 2617567 - 2617830 | 9947.12 |
| pyruvate kinase | SAMN06295920_105124 | Not Available | Positive | 2618009 - 2619466 | 52330.7 |
| amidase | SAMN06295920_105125 | Not Available | Negative | 2619499 - 2621064 | 55035.0 |
| carboxypeptidase c (cathepsin a) | SAMN06295920_105126 | Not Available | Positive | 2621220 - 2622830 | 58327.0 |
| hypothetical protein | SAMN06295920_105127 | Not Available | Negative | 2622880 - 2623248 | 11538.6 |
| hypothetical protein | SAMN06295920_105128 | Not Available | Negative | 2623514 - 2623624 | 4009.07 |
| 2-haloacid dehalogenase | SAMN06295920_105129 | Not Available | Negative | 2623690 - 2624271 | 21334.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.