Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN06295920_10590Not AvailablePositive2580382 - 25806188427.71
uncharacterized conserved protein yeao, duf488 familySAMN06295920_10591Not AvailablePositive2580632 - 258100313706.4
thiamine-phosphate diphosphorylaseSAMN06295920_10592Not AvailablePositive2581045 - 258175524793.3
predicted 5' dna nuclease, flap endonuclease-1-like, helix-3-turn-helix (h3th) domainSAMN06295920_10593Not AvailableNegative2581787 - 258230217722.4
phosphoribosylamine--glycine ligaseSAMN06295920_10594Not AvailableNegative2582344 - 258364544957.6
exodeoxyribonuclease vii large subunitSAMN06295920_10595Not AvailablePositive2583734 - 258511050218.3
hypothetical proteinSAMN06295920_10596Not AvailablePositive2585154 - 25853517095.51
murein dd-endopeptidase mepm and murein hydrolase activator nlpd, contain lysm domainSAMN06295920_10597Not AvailablePositive2585348 - 258624731171.9
hypothetical proteinSAMN06295920_10598Not AvailableNegative2586559 - 258709519260.1
tonb-dependent receptor plug domainSAMN06295920_10599Not AvailablePositive2587360 - 2590374108068.0

Displaying genes 2511 – 2520 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.