Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnd family efflux transporter, mfp subunit | SAMN06295920_10580 | Not Available | Positive | 2570594 - 2571493 | 32987.1 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN06295920_10581 | Not Available | Positive | 2571487 - 2572914 | 50363.0 |
| sodium/proton antiporter, cpa1 family | SAMN06295920_10582 | Not Available | Negative | 2572911 - 2574539 | 58611.7 |
| hypothetical protein | SAMN06295920_10583 | Not Available | Negative | 2574733 - 2574981 | 9027.6 |
| superoxide dismutase, fe-mn family | SAMN06295920_10584 | Not Available | Negative | 2574995 - 2575687 | 25046.4 |
| hypothetical protein | SAMN06295920_10585 | Not Available | Negative | 2575753 - 2576142 | 13193.7 |
| alkyl hydroperoxide reductase subunit ahpc (peroxiredoxin) | SAMN06295920_10586 | Not Available | Negative | 2576139 - 2577227 | 39893.6 |
| dna-binding transcriptional regulator, lysr family | SAMN06295920_10587 | Not Available | Positive | 2577375 - 2578223 | 30746.0 |
| hypothetical protein | SAMN06295920_10588 | Not Available | Positive | 2578220 - 2578711 | 17818.4 |
| cystathionine gamma-synthase | SAMN06295920_10589 | Not Available | Positive | 2579188 - 2580360 | 41101.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.