Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
electron transfer flavoprotein alpha subunit apoproteinSAMN06295920_10549Not AvailablePositive2535776 - 253670531301.3
glycine/d-amino acid oxidaseSAMN06295920_10550Not AvailableNegative2536777 - 253794941616.6
hypothetical proteinSAMN06295920_10551Not AvailablePositive2538096 - 25382696243.41
dna polymeraseSAMN06295920_10552Not AvailableNegative2538358 - 253971950406.7
putative dna modification/repair radical sam proteinSAMN06295920_10553Not AvailableNegative2539730 - 254096545710.0
chat domain-containing proteinSAMN06295920_10554Not AvailableNegative2541082 - 2544186109573.0
filamentous hemagglutinin family n-terminal domain-containing proteinSAMN06295920_10555Not AvailableNegative2544186 - 2548781144663.0
hemolysin activation/secretion proteinSAMN06295920_10556Not AvailableNegative2548784 - 255058965674.4
vitamin b12 transporterSAMN06295920_10558Not AvailablePositive2551056 - 255294268342.2
two-component system, luxr family, response regulator fixjSAMN06295920_10559Not AvailableNegative2552994 - 255362022733.6

Displaying genes 2471 – 2480 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.