Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yip1 domain-containing protein | SAMN06295920_10518 | Not Available | Negative | 2504613 - 2505233 | 21562.2 |
| catechol 2,3-dioxygenase | SAMN06295920_10519 | Not Available | Negative | 2505311 - 2505748 | 16137.2 |
| transcriptional regulator, lyttr family | SAMN06295920_10520 | Not Available | Negative | 2505739 - 2506509 | 27940.3 |
| predicted membrane protein | SAMN06295920_10521 | Not Available | Positive | 2506628 - 2507314 | 24087.9 |
| predicted atpase | SAMN06295920_10522 | Not Available | Negative | 2507218 - 2507781 | 19898.9 |
| indole-3-glycerol phosphate synthase | SAMN06295920_10523 | Not Available | Positive | 2507830 - 2508624 | 28468.0 |
| cyclic pyranopterin monophosphate synthase subunit moac | SAMN06295920_10524 | Not Available | Positive | 2508628 - 2509113 | 16488.2 |
| molybdopterin molybdochelatase | SAMN06295920_10525 | Not Available | Positive | 2509113 - 2510300 | 40199.9 |
| repressor lexa | SAMN06295920_10526 | Not Available | Positive | 2510358 - 2511032 | 24501.7 |
| competence protein comec | SAMN06295920_10527 | Not Available | Negative | 2511217 - 2513361 | 74782.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.