Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane receptor proteins, mostly fe transport | SAMN06295920_104434 | Not Available | Positive | 2412158 - 2414470 | 81522.8 |
| hypothetical protein | SAMN06295920_104435 | Not Available | Positive | 2414457 - 2415206 | 26865.2 |
| hypothetical protein | SAMN06295920_104436 | Not Available | Positive | 2415285 - 2416190 | 32270.5 |
| uncharacterized conserved protein, duf2141 family | SAMN06295920_104437 | Not Available | Positive | 2416187 - 2416696 | 17902.7 |
| alpha-1,6-mannosyltransferase | SAMN06295920_104438 | Not Available | Positive | 2416693 - 2417868 | 42083.7 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN06295920_104439 | Not Available | Positive | 2417880 - 2419010 | 41286.4 |
| amidase | SAMN06295920_104440 | Not Available | Negative | 2419124 - 2420590 | 51993.6 |
| transcriptional regulator, tetr family | SAMN06295920_104441 | Not Available | Positive | 2420742 - 2421476 | 27055.6 |
| 4-aminobutyrate aminotransferase / (s)-3-amino-2-methylpropionate transaminase | SAMN06295920_104442 | Not Available | Positive | 2421646 - 2422950 | 45479.1 |
| dna-binding transcriptional regulator, lysr family | SAMN06295920_104443 | Not Available | Positive | 2422992 - 2423948 | 35349.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.