Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
outer membrane receptor for ferrienterochelin and colicinsSAMN06295920_104424Not AvailableNegative2400837 - 240304778559.6
d-arginine dehydrogenaseSAMN06295920_104425Not AvailableNegative2403092 - 240425540991.4
transcriptional regulator, xre family with cupin sensorSAMN06295920_104426Not AvailablePositive2404464 - 240507222853.6
metal-dependent hydrolase, endonuclease/exonuclease/phosphatase familySAMN06295920_104427Not AvailableNegative2405214 - 240627537811.9
cdp-glycerol glycerophosphotransferase, tagb/spsb familySAMN06295920_104428Not AvailablePositive2406391 - 240759645158.4
hypothetical proteinSAMN06295920_104429Not AvailablePositive2407599 - 240850734686.8
glycosyltransferase involved in cell wall bisynthesisSAMN06295920_104430Not AvailableNegative2408422 - 240959741523.7
hypothetical proteinSAMN06295920_104431Not AvailablePositive2409739 - 241053628884.4
rna polymerase sigma-70 factor, ecf subfamilySAMN06295920_104432Not AvailablePositive2410536 - 241120124638.3
fecr family proteinSAMN06295920_104433Not AvailablePositive2411188 - 241214433696.3

Displaying genes 2351 – 2360 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.