Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carbon-monoxide dehydrogenase medium subunitSAMN06295920_104414Not AvailablePositive2390073 - 239089128953.2
fatty-acyl-coa synthaseSAMN06295920_104415Not AvailablePositive2390896 - 239243755482.8
hypothetical proteinSAMN06295920_104416Not AvailableNegative2392642 - 23927945450.56
alkylhydroperoxidase ahpd family core domain-containing proteinSAMN06295920_104417Not AvailableNegative2393018 - 239349117313.8
cupin domain proteinSAMN06295920_104418Not AvailableNegative2393511 - 239392114368.1
gntr family transcriptional regulator / mocr family aminotransferaseSAMN06295920_104419Not AvailablePositive2393995 - 239544651790.3
uncharacterized conserved protein yece, duf72 familySAMN06295920_104420Not AvailableNegative2395415 - 239631133630.3
microcystin degradation protein mlrc, contains duf1485 domainSAMN06295920_104421Not AvailableNegative2396278 - 239781954649.5
cubico group peptidase, beta-lactamase class c familySAMN06295920_104422Not AvailableNegative2397816 - 239941457206.9
predicted arabinose efflux permease, mfs familySAMN06295920_104423Not AvailableNegative2399446 - 240077145884.4

Displaying genes 2341 – 2350 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.