Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase ssud and methylene tetrahydromethanopterin reductase)SAMN06295920_104374Not AvailablePositive2338280 - 233941642505.5
2-oxohept-3-enedioate hydrataseSAMN06295920_104375Not AvailablePositive2339421 - 234022729240.9
2,4-dihydroxyhept-2-enedioate aldolaseSAMN06295920_104376Not AvailablePositive2340230 - 234102427407.8
vanillate o-demethylase monooxygenase subunitSAMN06295920_104377Not AvailableNegative2341018 - 234206138955.9
fmn-dependent oxidoreductase, nitrilotriacetate monooxygenase familySAMN06295920_104378Not AvailableNegative2342087 - 234347550658.8
nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) familySAMN06295920_104379Not AvailablePositive2343641 - 234430623682.0
para-nitrobenzyl esteraseSAMN06295920_104380Not AvailablePositive2344338 - 234591556245.2
transcriptional regulator, lysr familySAMN06295920_104381Not AvailableNegative2346091 - 234702935363.9
hypothetical proteinSAMN06295920_104382Not AvailableNegative2347109 - 234766019761.7
gentisate 1,2-dioxygenaseSAMN06295920_104383Not AvailableNegative2347685 - 234880940807.3

Displaying genes 2301 – 2310 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.