Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-phenylpropionate/cinnamic acid dioxygenase, small subunit | SAMN06295920_104364 | Not Available | Negative | 2326744 - 2327307 | 21862.9 |
| phenylpropionate dioxygenase, large terminal subunit | SAMN06295920_104365 | Not Available | Negative | 2327304 - 2328575 | 48330.6 |
| tartronate semialdehyde reductase | SAMN06295920_104366 | Not Available | Negative | 2328590 - 2329384 | 27415.5 |
| hypothetical protein | SAMN06295920_104367 | Not Available | Negative | 2329386 - 2329493 | 3652.47 |
| vanillate o-demethylase monooxygenase subunit | SAMN06295920_104368 | Not Available | Positive | 2329822 - 2330910 | 40195.8 |
| choline dehydrogenase | SAMN06295920_104369 | Not Available | Positive | 2330915 - 2332531 | 57532.6 |
| dna-binding transcriptional regulator, lysr family | SAMN06295920_104370 | Not Available | Negative | 2332533 - 2333462 | 35218.4 |
| ureidoacrylate peracid hydrolase | SAMN06295920_104371 | Not Available | Negative | 2333582 - 2334265 | 24747.5 |
| iron complex outermembrane recepter protein | SAMN06295920_104372 | Not Available | Negative | 2334406 - 2336682 | 80881.3 |
| vanillate o-demethylase monooxygenase subunit | SAMN06295920_104373 | Not Available | Negative | 2336902 - 2337954 | 38854.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.