Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
outer membrane receptor proteins, mostly fe transportSAMN06295920_104354Not AvailablePositive2314279 - 231658282577.6
predicted arabinose efflux permease, mfs familySAMN06295920_104355Not AvailablePositive2316612 - 231798548467.9
nadp-dependent 3-hydroxy acid dehydrogenase ydfgSAMN06295920_104356Not AvailablePositive2317986 - 231877727342.8
3-isopropylmalate dehydratase, large subunitSAMN06295920_104357Not AvailablePositive2318814 - 232024150963.2
3-isopropylmalate dehydratase, small subunitSAMN06295920_104358Not AvailablePositive2320238 - 232087023009.3
2-methylisocitrate lyase, pep mutase familySAMN06295920_104359Not AvailablePositive2320867 - 232172430140.5
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN06295920_104360Not AvailablePositive2321717 - 232246925822.0
lactate dehydrogenaseSAMN06295920_104361Not AvailablePositive2322466 - 232339532601.7
gntr family transcriptional regulator, vanillate catabolism transcriptional regulatorSAMN06295920_104362Not AvailablePositive2323512 - 232427028307.7
iron complex outermembrane recepter proteinSAMN06295920_104363Not AvailableNegative2324483 - 232670279834.9

Displaying genes 2281 – 2290 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.