Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| proline iminopeptidase | SAMN06295920_104274 | Not Available | Negative | 2230676 - 2231635 | 35570.9 |
| xaa-pro dipeptidase | SAMN06295920_104275 | Not Available | Positive | 2231661 - 2232917 | 44821.9 |
| inorganic triphosphatase ygif, contains cyth and chad domains | SAMN06295920_104276 | Not Available | Positive | 2232983 - 2234455 | 54732.7 |
| l,d-transpeptidase catalytic domain | SAMN06295920_104277 | Not Available | Positive | 2234400 - 2235074 | 23599.4 |
| hypothetical protein | SAMN06295920_104278 | Not Available | Positive | 2235067 - 2235168 | 4096.16 |
| hypothetical protein | SAMN06295920_104279 | Not Available | Positive | 2235206 - 2236804 | 57401.5 |
| hypothetical protein | SAMN06295920_104280 | Not Available | Negative | 2236788 - 2237009 | 8044.53 |
| voltage-gated potassium channel | SAMN06295920_104281 | Not Available | Negative | 2237019 - 2238077 | 38096.3 |
| hypothetical protein | SAMN06295920_104282 | Not Available | Positive | 2238182 - 2239117 | 31319.1 |
| transcriptional regulator, arac family with amidase-like domain | SAMN06295920_104283 | Not Available | Negative | 2239125 - 2240120 | 36100.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.