Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295920_104244 | Not Available | Positive | 2201934 - 2202956 | 37575.1 |
| pyrroline-5-carboxylate reductase | SAMN06295920_104245 | Not Available | Negative | 2202953 - 2203759 | 27175.8 |
| hypothetical protein | SAMN06295920_104246 | Not Available | Negative | 2203764 - 2204276 | 19475.8 |
| bmfp domain-containing protein yqic | SAMN06295920_104247 | Not Available | Negative | 2204373 - 2204633 | 9445.09 |
| tspo and mbr related proteins | SAMN06295920_104248 | Not Available | Negative | 2204667 - 2205224 | 20397.9 |
| 23s rrna (cytidine1920-2'-o)/16s rrna (cytidine1409-2'-o)-methyltransferase | SAMN06295920_104249 | Not Available | Negative | 2205221 - 2205982 | 26839.1 |
| Trna-val | Not Available | Not Available | Positive | 2206000 - 2206075 | Not Available |
| hypothetical protein | SAMN06295920_104251 | Not Available | Negative | 2206152 - 2206433 | 10266.3 |
| hypothetical protein | SAMN06295920_104252 | Not Available | Negative | 2206430 - 2207695 | 43398.4 |
| hypothetical protein | SAMN06295920_104253 | Not Available | Positive | 2207722 - 2207970 | 9495.41 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.