Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative dna methylase | SAMN06295920_104224 | Not Available | Negative | 2162467 - 2165268 | 102460.0 |
| hypothetical protein | SAMN06295920_104225 | Not Available | Negative | 2165252 - 2169481 | 157266.0 |
| hypothetical protein | SAMN06295920_104226 | Not Available | Negative | 2169478 - 2169708 | 8103.72 |
| snf2 family n-terminal domain-containing protein | SAMN06295920_104227 | Not Available | Negative | 2169717 - 2173220 | 132220.0 |
| hypothetical protein | SAMN06295920_104228 | Not Available | Negative | 2173243 - 2174127 | 33364.9 |
| pd-(d/e)xk nuclease superfamily protein | SAMN06295920_104229 | Not Available | Positive | 2174311 - 2176965 | 94306.7 |
| exodeoxyribonuclease-5 | SAMN06295920_104230 | Not Available | Positive | 2176962 - 2180357 | 121266.0 |
| superfamily ii dna or rna helicase | SAMN06295920_104231 | Not Available | Positive | 2180372 - 2183713 | 123696.0 |
| helicase conserved c-terminal domain-containing protein | SAMN06295920_104232 | Not Available | Negative | 2183756 - 2186941 | 117018.0 |
| hypothetical protein | SAMN06295920_104233 | Not Available | Negative | 2186938 - 2188791 | 67114.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.