Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv secretion system protein virb4 | SAMN06295920_104214 | Not Available | Positive | 2149962 - 2152400 | 89113.3 |
| p-type conjugative transfer protein trbj | SAMN06295920_104215 | Not Available | Positive | 2152397 - 2153158 | 27111.1 |
| conjugative transfer region protein trbk | SAMN06295920_104216 | Not Available | Positive | 2153169 - 2153546 | 13100.3 |
| type iv secretion system protein trbl | SAMN06295920_104217 | Not Available | Positive | 2153549 - 2154901 | 44788.2 |
| type iv secretion system protein virb5 | SAMN06295920_104218 | Not Available | Positive | 2154904 - 2155587 | 25326.0 |
| type iv secretion system protein virb9 | SAMN06295920_104219 | Not Available | Positive | 2155584 - 2156654 | 38628.1 |
| type iv secretion system protein virb10 | SAMN06295920_104220 | Not Available | Positive | 2156651 - 2157904 | 44206.3 |
| hypothetical protein | SAMN06295920_104221 | Not Available | Positive | 2157906 - 2158145 | 8566.56 |
| transcriptional regulator, lysr family | SAMN06295920_104222 | Not Available | Negative | 2158078 - 2159037 | 34973.2 |
| hypothetical protein | SAMN06295920_104223 | Not Available | Negative | 2159154 - 2162453 | 121114.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.