Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protein of unknown functionSAMN06295920_104204Not AvailablePositive2141015 - 214149718419.0
conjugative transfer signal peptidase trafSAMN06295920_104205Not AvailablePositive2141494 - 214203919821.4
uncharacterized conserved protein, duf736 familySAMN06295920_104206Not AvailablePositive2142106 - 214244112355.3
transglycosylase slt domain-containing proteinSAMN06295920_104207Not AvailablePositive2142446 - 214316225074.7
type iv secretory pathway, vird2 components (relaxase)SAMN06295920_104208Not AvailablePositive2143455 - 214550374997.3
type iv secretion system protein vird4SAMN06295920_104209Not AvailablePositive2145706 - 214769772988.4
ribbon-helix-helix protein, copg familySAMN06295920_104210Not AvailablePositive2147681 - 214814517463.1
type iv secretion system protein virb11SAMN06295920_104211Not AvailablePositive2148315 - 214934635786.3
type iv secretion system protein virb2SAMN06295920_104212Not AvailablePositive2149343 - 214967511557.5
type iv secretion system protein virb3SAMN06295920_104213Not AvailablePositive2149675 - 21499479445.9

Displaying genes 2131 – 2140 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.