Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295920_104174 | Not Available | Negative | 2113151 - 2113525 | 12959.5 |
| ynbe-like lipoprotein | SAMN06295920_104175 | Not Available | Negative | 2113522 - 2113734 | 7552.38 |
| dicarboxylate transport | SAMN06295920_104176 | Not Available | Negative | 2113799 - 2116960 | 109469.0 |
| hypothetical protein | SAMN06295920_104177 | Not Available | Positive | 2117155 - 2118933 | 64775.0 |
| arabinose-5-phosphate isomerase | SAMN06295920_104178 | Not Available | Positive | 2118945 - 2119949 | 35525.4 |
| dna repair protein radc | SAMN06295920_104179 | Not Available | Positive | 2120006 - 2120566 | 20320.6 |
| phage integrase family protein | SAMN06295920_104180 | Not Available | Positive | 2120794 - 2121984 | 45660.0 |
| hypothetical protein | SAMN06295920_104181 | Not Available | Positive | 2122103 - 2122468 | 13469.1 |
| helix-turn-helix domain-containing protein | SAMN06295920_104182 | Not Available | Positive | 2122474 - 2122845 | 13551.3 |
| hypothetical protein | SAMN06295920_104183 | Not Available | Positive | 2122951 - 2123388 | 15337.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.