Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-dehydroquinate dehydratase | SAMN06295920_10184 | Not Available | Negative | 83790 - 84230 | 15792.9 |
| thiazole-phosphate synthase | SAMN06295920_10185 | Not Available | Positive | 84328 - 85335 | 35554.2 |
| pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing protein | SAMN06295920_10186 | Not Available | Negative | 85364 - 86758 | 50908.1 |
| uncharacterized conserved protein, cupin superfamily | SAMN06295920_10187 | Not Available | Positive | 86907 - 87371 | 17198.0 |
| quinol monooxygenase ygin | SAMN06295920_10188 | Not Available | Negative | 87552 - 87878 | 12578.0 |
| 5'-nucleotidase, lipoprotein e(p4) family | SAMN06295920_10189 | Not Available | Positive | 88097 - 88990 | 30978.9 |
| beta-lactamase class c | SAMN06295920_10190 | Not Available | Positive | 89172 - 90521 | 49404.6 |
| 3-isopropylmalate dehydratase, large subunit | SAMN06295920_10191 | Not Available | Positive | 90702 - 92141 | 51071.1 |
| glyoxylase, beta-lactamase superfamily ii | SAMN06295920_10192 | Not Available | Positive | 92138 - 92971 | 29513.3 |
| 3-isopropylmalate dehydratase, small subunit | SAMN06295920_10193 | Not Available | Positive | 92971 - 93549 | 20981.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.