Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-demethylubiquinone-9 3-methyltransferase | SAMN06295920_104154 | Not Available | Positive | 2096004 - 2096738 | 25868.2 |
| methyltransferase domain-containing protein | SAMN06295920_104155 | Not Available | Positive | 2096735 - 2097484 | 27108.0 |
| hypothetical protein | SAMN06295920_104156 | Not Available | Positive | 2097481 - 2098284 | 29117.6 |
| mannose-6-phosphate isomerase, type 1 | SAMN06295920_104157 | Not Available | Negative | 2098200 - 2099084 | 31591.5 |
| hypothetical protein | SAMN06295920_104158 | Not Available | Negative | 2099263 - 2099811 | 20323.2 |
| hypothetical protein | SAMN06295920_104159 | Not Available | Negative | 2100059 - 2100316 | 9285.43 |
| histidine kinase | SAMN06295920_104160 | Not Available | Positive | 2100485 - 2102245 | 64186.6 |
| two component transcriptional regulator, lyttr family | SAMN06295920_104161 | Not Available | Positive | 2102325 - 2102972 | 24481.6 |
| 3-isopropylmalate dehydrogenase | SAMN06295920_104162 | Not Available | Negative | 2102985 - 2104025 | 36943.5 |
| dna replication and repair protein reco | SAMN06295920_104163 | Not Available | Negative | 2104097 - 2104828 | 25799.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.