Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transglutaminase-like superfamily proteinSAMN06295920_104104Not AvailableNegative2039769 - 204020015776.6
coenzyme pqq synthesis protein d (pqqd)SAMN06295920_104105Not AvailableNegative2040184 - 204049511176.3
hypothetical proteinSAMN06295920_104106Not AvailableNegative2040586 - 20407264765.42
uncharacterized protein, had superfamilySAMN06295920_104107Not AvailableNegative2041344 - 204235138090.9
l-2-hydroxyglutarate oxidase lhgoSAMN06295920_104108Not AvailableNegative2042550 - 204348833136.0
glycosyltransferase, gt2 familySAMN06295920_104109Not AvailablePositive2043799 - 204477636417.0
dtdp-4-dehydrorhamnose 3,5-epimeraseSAMN06295920_104110Not AvailableNegative2044815 - 204536320572.4
predicted homoserine dehydrogenase, contains c-terminal saf domainSAMN06295920_104111Not AvailableNegative2045374 - 204669946328.8
glucose-1-phosphate cytidylyltransferaseSAMN06295920_104112Not AvailableNegative2046720 - 204749328763.2
udp-glucose 4-epimeraseSAMN06295920_104113Not AvailableNegative2047511 - 204858137999.2

Displaying genes 2031 – 2040 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Result columns

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Health Effects

No health effects information available for this bacterium.