Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protein of unknown function with hxxee motif-containing proteinSAMN06295920_103526Not AvailablePositive1892633 - 189310917039.1
ribosome-associated proteinSAMN06295920_103527Not AvailableNegative1893120 - 189354515537.8
trna pseudouridine32 synthase / 23s rrna pseudouridine746 synthaseSAMN06295920_103528Not AvailableNegative1893550 - 189422424068.2
lsu ribosomal protein l25pSAMN06295920_103529Not AvailablePositive1894355 - 189497822293.7
peptidyl-trna hydrolaseSAMN06295920_103530Not AvailablePositive1895118 - 189568720643.8
glyoxalase superfamily enzyme, possibly 3-demethylubiquinone-9 3-methyltransferaseSAMN06295920_103531Not AvailablePositive1895699 - 189608814325.8
tetratricopeptide repeat-containing proteinSAMN06295920_103532Not AvailablePositive1896159 - 189901499934.1
hypothetical proteinSAMN06295920_103533Not AvailableNegative1899201 - 190156478338.5
tetratricopeptide repeat-containing proteinSAMN06295920_103534Not AvailableNegative1901567 - 190289547283.4
caspase domain-containing proteinSAMN06295920_103535Not AvailablePositive1903017 - 190430643581.1

Displaying genes 1891 – 1900 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Result columns

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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.