Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation diffusion facilitator family transporter | SAMN06295920_103516 | Not Available | Negative | 1883553 - 1884488 | 33531.6 |
| l,d-transpeptidase catalytic domain | SAMN06295920_103517 | Not Available | Positive | 1884647 - 1885927 | 45831.4 |
| l,d-transpeptidase catalytic domain | SAMN06295920_103518 | Not Available | Positive | 1886239 - 1886718 | 17179.3 |
| d-alanyl-d-alanine carboxypeptidase | SAMN06295920_103519 | Not Available | Positive | 1886821 - 1887801 | 34449.6 |
| hypothetical protein | SAMN06295920_103520 | Not Available | Negative | 1887916 - 1888137 | 7859.89 |
| dihydrolipoamide dehydrogenase | SAMN06295920_103521 | Not Available | Negative | 1888247 - 1889644 | 49950.6 |
| acyl-coa thioesterase ycia | SAMN06295920_103522 | Not Available | Negative | 1889660 - 1890049 | 13678.4 |
| pyruvate dehydrogenase e2 component (dihydrolipoamide acetyltransferase) | SAMN06295920_103523 | Not Available | Negative | 1890049 - 1891371 | 45199.8 |
| universal stress protein family protein | SAMN06295920_103524 | Not Available | Positive | 1891519 - 1891962 | 15383.5 |
| gaf domain-containing protein | SAMN06295920_103525 | Not Available | Negative | 1892066 - 1892548 | 16962.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.