Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
23s rrna m(5)u-1939 methyltransferaseSAMN06295920_10144Not AvailablePositive43639 - 4485644029.9
hypothetical proteinSAMN06295920_10145Not AvailableNegative45117 - 4555115909.0
sensors of blue-light using fadSAMN06295920_10146Not AvailablePositive45708 - 4616016849.0
homospermidine synthase (spermidine-specific)SAMN06295920_10147Not AvailableNegative46245 - 4729738474.9
ornithine decarboxylaseSAMN06295920_10148Not AvailableNegative47420 - 4861343353.9
cobalt-zinc-cadmium efflux system proteinSAMN06295920_10149Not AvailablePositive48907 - 4991134467.4
udp-n-acetylglucosamine 2-epimerase (non-hydrolysing)SAMN06295920_10150Not AvailablePositive49920 - 5102339865.0
phage shock protein c (pspc) family proteinSAMN06295920_10151Not AvailablePositive51198 - 5153011604.8
peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domainsSAMN06295920_10152Not AvailableNegative51395 - 5264544389.1
choline dehydrogenaseSAMN06295920_10153Not AvailablePositive52860 - 5429652387.3

Displaying genes 161 – 170 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.