Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
para-nitrobenzyl esteraseSAMN06295920_103245Not AvailablePositive1631552 - 163304253210.9
d-lactate dehydrogenase (cytochrome)SAMN06295920_103246Not AvailablePositive1633113 - 163451650637.6
transcriptional regulator, gntr familySAMN06295920_103247Not AvailablePositive1634590 - 163533026606.8
hypothetical proteinSAMN06295920_103248Not AvailablePositive1635511 - 16357719554.38
rnd family efflux transporter, mfp subunitSAMN06295920_103249Not AvailablePositive1636000 - 163679127930.2
hydrophobe/amphiphile efflux-1 (hae1) family proteinSAMN06295920_103250Not AvailablePositive1637051 - 1640236113559.0
efflux transporter, outer membrane factor (omf) lipoprotein, nodt familySAMN06295920_103251Not AvailablePositive1640248 - 164166950269.5
diguanylate cyclase (ggdef) domain-containing proteinSAMN06295920_103252Not AvailablePositive1641756 - 164357367468.8
aminopeptidase nSAMN06295920_103253Not AvailablePositive1643661 - 164628893312.3
formyltetrahydrofolate deformylaseSAMN06295920_103254Not AvailableNegative1646308 - 164716231023.3

Displaying genes 1651 – 1660 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.