Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily | SAMN06295920_103235 | Not Available | Positive | 1620076 - 1620990 | 34117.5 |
| isochorismate pyruvate lyase | SAMN06295920_103236 | Not Available | Negative | 1620921 - 1621247 | 11863.2 |
| ssu ribosomal protein s4p | SAMN06295920_103237 | Not Available | Positive | 1621447 - 1622061 | 23076.9 |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN06295920_103238 | Not Available | Negative | 1622188 - 1623273 | 40641.9 |
| transcriptional regulator, tetr family | SAMN06295920_103239 | Not Available | Negative | 1623441 - 1624073 | 23469.5 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN06295920_103240 | Not Available | Positive | 1624168 - 1625634 | 50849.3 |
| membrane fusion protein, multidrug efflux system | SAMN06295920_103241 | Not Available | Positive | 1625627 - 1626748 | 39914.7 |
| mfs transporter, dha2 family, multidrug resistance protein | SAMN06295920_103242 | Not Available | Positive | 1626753 - 1628276 | 54576.8 |
| atp-dependent lon protease | SAMN06295920_103243 | Not Available | Negative | 1628483 - 1630879 | 86586.6 |
| molecular chaperone ibpa, hsp20 family | SAMN06295920_103244 | Not Available | Negative | 1630876 - 1631298 | 15709.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.