Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphate abc transporter substrate-binding protein, phot familySAMN06295920_103205Not AvailableNegative1585205 - 158625436469.2
hypothetical proteinSAMN06295920_103206Not AvailablePositive1586631 - 158700213323.7
uncharacterized conserved protein yndb, ahsa1/start domainSAMN06295920_103207Not AvailableNegative1587118 - 158756716893.2
rna polymerase, sigma subunit, ecf familySAMN06295920_103208Not AvailableNegative1587650 - 158889444943.0
uncharacterized conserved proteinSAMN06295920_103209Not AvailableNegative1588891 - 158926513180.8
metal-dependent hydrolase, endonuclease/exonuclease/phosphatase familySAMN06295920_103210Not AvailablePositive1589472 - 159053036604.5
type 4 prepilin peptidase 1 aspartic peptidase. merops family a24aSAMN06295920_103211Not AvailableNegative1590553 - 159129625406.8
l-proline dehydrogenase /delta-1-pyrroline-5-carboxylate dehydrogenaseSAMN06295920_103212Not AvailableNegative1591613 - 1594711108962.0
lrp/asnc family transcriptional regulator, leucine-responsive regulatory proteinSAMN06295920_103213Not AvailablePositive1594821 - 159530017954.9
iron complex outermembrane recepter proteinSAMN06295920_103214Not AvailableNegative1595383 - 159786389240.1

Displaying genes 1611 – 1620 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.