Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heavy metal efflux pump, czca family | SAMN06295920_10134 | Not Available | Positive | 30475 - 33669 | 112895.0 |
| rnd family efflux transporter, mfp subunit | SAMN06295920_10135 | Not Available | Positive | 33662 - 34870 | 41376.2 |
| outer membrane protein, multidrug efflux system | SAMN06295920_10136 | Not Available | Positive | 34860 - 36260 | 49249.0 |
| hypothetical protein | SAMN06295920_10137 | Not Available | Negative | 36299 - 36883 | 21328.8 |
| putative zn-dependent protease, contains tpr repeats | SAMN06295920_10138 | Not Available | Negative | 36894 - 38084 | 43654.8 |
| hypothetical protein | SAMN06295920_10139 | Not Available | Negative | 38086 - 38832 | 26180.9 |
| dihydroxyacid dehydratase | SAMN06295920_10140 | Not Available | Negative | 38948 - 40801 | 65527.5 |
| dna-binding transcriptional regulator, lysr family | SAMN06295920_10141 | Not Available | Positive | 40910 - 41812 | 32552.4 |
| hypothetical protein | SAMN06295920_10142 | Not Available | Positive | 41901 - 42272 | 12811.5 |
| yjef c-terminal region, hydroxyethylthiazole kinase-related/yjef n-terminal region | SAMN06295920_10143 | Not Available | Positive | 42269 - 43642 | 45883.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.