Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage repressor protein c, contains cro/c1-type hth and peptisase s24 domains | SAMN06295920_103142 | Not Available | Negative | 1539687 - 1540346 | 23722.2 |
| dna-binding transcriptional regulator ydas, prophage-encoded, cro superfamily | SAMN06295920_103143 | Not Available | Positive | 1540431 - 1540673 | 8374.17 |
| hypothetical protein | SAMN06295920_103144 | Not Available | Positive | 1540745 - 1540846 | 3594.38 |
| hypothetical protein | SAMN06295920_103145 | Not Available | Positive | 1541189 - 1541374 | 6412.04 |
| hypothetical protein | SAMN06295920_103146 | Not Available | Positive | 1541375 - 1541557 | 6855.36 |
| hypothetical protein | SAMN06295920_103147 | Not Available | Positive | 1541561 - 1542031 | 17302.6 |
| hypothetical protein | SAMN06295920_103148 | Not Available | Positive | 1542028 - 1542252 | 8278.74 |
| hypothetical protein | SAMN06295920_103149 | Not Available | Positive | 1542350 - 1542898 | 20851.9 |
| hypothetical protein | SAMN06295920_103150 | Not Available | Positive | 1542898 - 1543521 | 23175.9 |
| hypothetical protein | SAMN06295920_103151 | Not Available | Positive | 1543518 - 1544378 | 30791.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.