Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porphobilinogen synthase | SAMN06295920_103112 | Not Available | Negative | 1517802 - 1518794 | 35564.6 |
| lipid kinase, yegs/rv2252/bmru family | SAMN06295920_103113 | Not Available | Positive | 1518905 - 1519807 | 32135.9 |
| putative efflux protein, mate family | SAMN06295920_103114 | Not Available | Negative | 1519815 - 1521212 | 49435.4 |
| valyl-trna synthetase | SAMN06295920_103115 | Not Available | Negative | 1521218 - 1523908 | 99091.6 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | SAMN06295920_103116 | Not Available | Negative | 1524088 - 1526130 | 72869.6 |
| hypothetical protein | SAMN06295920_103117 | Not Available | Negative | 1526214 - 1526771 | 20148.2 |
| outer membrane protein | SAMN06295920_103118 | Not Available | Negative | 1526786 - 1528270 | 51829.0 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | SAMN06295920_103119 | Not Available | Negative | 1528287 - 1528931 | 21713.3 |
| Trna-cys | Not Available | Not Available | Positive | 1529120 - 1529193 | Not Available |
| phage integrase family protein | SAMN06295920_103121 | Not Available | Negative | 1529205 - 1530365 | 43578.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.