Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-keto-4-pentenoate hydratase | SAMN06295920_1032 | Not Available | Positive | 1394960 - 1395805 | 29719.9 |
| 2-oxo-3-hexenedioate decarboxylase | SAMN06295920_1033 | Not Available | Positive | 1395798 - 1396577 | 27567.0 |
| imidazolonepropionase | SAMN06295920_1034 | Not Available | Negative | 1396646 - 1397965 | 45881.0 |
| outer membrane receptor proteins, mostly fe transport | SAMN06295920_1035 | Not Available | Negative | 1398022 - 1400316 | 81688.9 |
| zinc carboxypeptidase | SAMN06295920_1036 | Not Available | Positive | 1400767 - 1403619 | 104973.0 |
| acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase | SAMN06295920_1037 | Not Available | Positive | 1403690 - 1405255 | 56522.8 |
| membrane dipeptidase | SAMN06295920_1038 | Not Available | Positive | 1405278 - 1406438 | 41265.7 |
| sugar phosphate permease | SAMN06295920_1039 | Not Available | Positive | 1406435 - 1407736 | 45397.5 |
| cubico group peptidase, beta-lactamase class c family | SAMN06295920_10310 | Not Available | Negative | 1407757 - 1408977 | 43693.3 |
| uncharacterized conserved protein | SAMN06295920_10311 | Not Available | Positive | 1409166 - 1409654 | 17918.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.