Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295920_102548 | Not Available | Negative | 1350018 - 1350380 | 13061.3 |
| patatin-related protein | SAMN06295920_102549 | Not Available | Negative | 1350377 - 1352701 | 85487.2 |
| dna repair protein rada/sms | SAMN06295920_102550 | Not Available | Positive | 1352961 - 1354328 | 47939.8 |
| membrane protein required for colicin v production | SAMN06295920_102551 | Not Available | Positive | 1354341 - 1354913 | 19785.7 |
| catechol 2,3-dioxygenase | SAMN06295920_102552 | Not Available | Negative | 1355033 - 1355461 | 15892.8 |
| dna repair photolyase | SAMN06295920_102553 | Not Available | Positive | 1355609 - 1356697 | 40067.2 |
| hemerythrin hhe cation binding domain-containing protein | SAMN06295920_102554 | Not Available | Positive | 1356844 - 1357395 | 20300.3 |
| molybdenum cofactor biosynthesis protein b | SAMN06295920_102555 | Not Available | Negative | 1357520 - 1358047 | 19100.8 |
| soluble lytic murein transglycosylase | SAMN06295920_102556 | Not Available | Negative | 1358221 - 1359993 | 62058.8 |
| dna polymerase | SAMN06295920_102557 | Not Available | Negative | 1359993 - 1360730 | 25951.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.