Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine38-40 synthase | SAMN06295920_102518 | Not Available | Negative | 1322356 - 1323120 | 27769.2 |
| methionyl-trna formyltransferase | SAMN06295920_102519 | Not Available | Negative | 1323117 - 1324043 | 32477.1 |
| dna replication and repair protein recr | SAMN06295920_102520 | Not Available | Positive | 1324096 - 1324692 | 21361.0 |
| hypothetical protein | SAMN06295920_102521 | Not Available | Positive | 1324789 - 1325160 | 14393.7 |
| peptide deformylase | SAMN06295920_102522 | Not Available | Positive | 1325242 - 1325775 | 20170.3 |
| pkhd-type hydroxylase | SAMN06295920_102523 | Not Available | Negative | 1325894 - 1326577 | 24724.6 |
| outer membrane transport energization protein tonb | SAMN06295920_102524 | Not Available | Negative | 1326585 - 1327313 | 25911.6 |
| rnase r | SAMN06295920_102525 | Not Available | Positive | 1327452 - 1329761 | 84552.5 |
| dctp deaminase | SAMN06295920_102526 | Not Available | Negative | 1329950 - 1330504 | 20524.5 |
| cytidine deaminase | SAMN06295920_102527 | Not Available | Negative | 1330636 - 1331091 | 15316.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.